Typical 2D Structure
Asparagine



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D-Loop V-Region T-Loop
Display 2D Consensus Structure
Display Statistical distribution of nucleotides
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Total number of organisms : 33



Statistical distribution of nucleotides (%)

5' Acceptor sterm (nt 1)
A
C
G
T
0
0
0
100
84,85
0
15,15
0
0
0
100
0
81,82
0
18,18
0
0
6,06
0
93,94
0
12,12
0
87,88
15,15
0
84,85
0
Connector 1 (nt 8)
A
C
G
T
100
0
0
0
96,97
0
3,03
0
5' D-stern (nt 10)
A
C
G
T
0
0
100
0
0
100
0
0
0
100
0
0
96,97
0
0
3,03
D-loop (nt 14)
A
C
G
T
6,06
0
90,91
3,03
3,03
3,03
6,06
87,88
15,15
3,03
0
81,82
12,12
0
81,82
6,06
57,58
6,06
12,12
24,24
21,21
12,12
0
63,64
3,03
3,03
0
81,82
0
0
0
6,06
84,85
0
9,09
6,06
3' D-stern (nt 22)
A
C
G
T
15,15
0
84,85
0
0
0
100
0
0
0
96,97
3,03
0
9,09
0
90,91
Connector 2 (nt 26)
A
C
G
T
45,45
0
45,45
9,09
5' Anticodon stern (nt 27)
A
C
G
T
3,03
12,12
0
84,85
0
0
0
100
0
0
0
100
100
0
0
0
0
0
100
0
Anticodon loop (nt 32)
A
C
G
T
0
100
0
0
0
0
0
100
0
0
100
0
0
0
0
100
0
0
0
100
100
0
0
0
100
0
0
0
5' Anticodon stern (nt 39)
A
C
G
T
0
100
0
0
0
0
0
100
100
0
0
0
100
0
0
0
72,73
0
24,24
3,03
Variable region (nt 44)
A
C
G
T
6,06
0
18,18
75,76
3,03
3,03
24,24
69,7
0
3,03
0
96,97
0
0
0
100
0
45,45
0
54,55
5' T-stern (nt 49)
A
C
G
T
6,06
0
93,94
0
0
3,03
0
96,97
24,24
0
75,76
0
0
0
100
0
0
0
100
0
T-loop (nt 54)
A
C
G
T
6,06
0
33,33
60,61
3,03
0
0
96,97
12,12
12,12
0
75,76
42,42
0
54,55
3,03
63,64
0
33,33
3,03
45,45
0
42,42
12,12
3,03
0
21,21
72,73
0
0
0
3,03
0
0
21,21
78,79
5' T-stern (nt 61)
A
C
G
T
0
100
0
0
0
100
0
0
0
75,76
0
24,24
78,79
0
18,18
3,03
0
42,42
0
57,58
3' Accepter sterm (nt 66)
A
C
G
T
0
72,73
0
27,27
72,73
0
27,27
0
69,7
0
30,3
0
0
9,09
0
90,91
0
100
0
0
0
0
0
100
100
0
0
0
Discriminator base (nt 73)
A
C
G
T
0
0
100
0

Base pairing : Watson Crick (WC), G-T and MisMatch (Mis)
WC (%)GT (%)Mis (%)
10000
84,8515,150
10000
90,919,090
75,7624,240
84,8515,150
87,8812,120
WC (%)GT (%)Mis (%)
9,0990,910
96,9703,03
10000
03,0396,97
WC (%)GT (%)Mis (%)
87,8812,120
10000
10000
10000
10000
WC (%)GT (%)Mis (%)
48,4851,520
81,8215,153,03
10000
10000
10000

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