Typical 2D Structure
Cysteine



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D-Loop V-Region T-Loop
Display 2D Consensus Structure
Display Statistical distribution of nucleotides
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Total number of organisms : 21



Statistical distribution of nucleotides (%)

5' Acceptor sterm (nt 1)
A
C
G
T
4,76
0
95,24
0
14,29
0
85,71
0
0
90,48
0
9,52
0
14,29
0
85,71
0
14,29
0
85,71
0
0
0
100
0
0
100
0
Connector 1 (nt 8)
A
C
G
T
95,24
0
4,76
0
100
0
0
0
5' D-stern (nt 10)
A
C
G
T
0
0
100
0
0
0
0
100
100
0
0
0
4,76
0
0
95,24
D-loop (nt 14)
A
C
G
T
85,71
0
9,52
4,76
14,29
0
4,76
80,95
66,67
0
9,52
23,81
14,29
0
0
14,29
9,52
0
0
0
0
0
0
4,76
80,95
0
9,52
9,52
3' D-stern (nt 22)
A
C
G
T
28,57
0
0
71,43
0
0
0
100
100
0
0
0
0
85,71
0
14,29
Connector 2 (nt 26)
A
C
G
T
9,52
0
90,48
0
5' Anticodon stern (nt 27)
A
C
G
T
0
0
0
100
0
0
0
100
0
0
100
0
100
0
0
0
100
0
0
0
Anticodon loop (nt 32)
A
C
G
T
0
0
0
100
0
0
0
100
0
0
100
0
0
100
0
0
100
0
0
0
100
0
0
0
100
0
0
0
5' Anticodon stern (nt 39)
A
C
G
T
0
0
0
100
0
0
0
100
0
100
0
0
85,71
0
14,29
0
76,19
0
23,81
0
Variable region (nt 44)
A
C
G
T
100
0
0
0
23,81
0
76,19
0
85,71
0
14,29
0
90,48
0
0
9,52
5' T-stern (nt 49)
A
C
G
T
0
0
100
0
0
28,57
0
71,43
95,24
0
4,76
0
4,76
0
95,24
0
0
33,33
0
66,67
T-loop (nt 54)
A
C
G
T
4,76
9,52
0
85,71
47,62
4,76
23,81
23,81
71,43
0
23,81
4,76
61,9
4,76
19,05
14,29
19,05
4,76
38,1
38,1
28,57
0
9,52
19,05
0
0
0
4,76
38,1
4,76
19,05
38,1
5' T-stern (nt 61)
A
C
G
T
9,52
0
85,71
4,76
0
90,48
0
9,52
0
0
0
100
19,05
0
80,95
0
0
100
0
0
3' Accepter sterm (nt 66)
A
C
G
T
0
100
0
0
66,67
0
28,57
4,76
61,9
0
38,1
0
23,81
0
76,19
0
0
0
100
0
0
80,95
0
19,05
0
42,86
0
57,14
Discriminator base (nt 73)
A
C
G
T
0
0
0
100

Base pairing : Watson Crick (WC), G-T and MisMatch (Mis)
WC (%)GT (%)Mis (%)
47,6252,380
95,244,760
90,489,520
38,161,90
76,1923,810
66,6728,574,76
10000
WC (%)GT (%)Mis (%)
85,7114,290
10000
10000
33,33066,67
WC (%)GT (%)Mis (%)
76,1923,810
85,7114,290
10000
10000
10000
WC (%)GT (%)Mis (%)
10000
47,6252,380
95,244,760
95,244,760
42,8652,384,76

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