Typical 2D Structure
Cysteine



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D-Loop V-Region T-Loop
Display 2D Consensus Structure
Display Statistical distribution of nucleotides
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Total number of organisms : 11



Statistical distribution of nucleotides (%)

5' Acceptor sterm (nt 1)
A
C
G
T
54,55
0
45,45
0
0
0
100
0
0
45,45
0
54,55
0
90,91
0
9,09
0
45,45
0
54,55
0
18,18
0
81,82
45,45
0
54,55
0
Connector 1 (nt 8)
A
C
G
T
100
0
0
0
0
0
100
0
5' D-stern (nt 10)
A
C
G
T
0
0
100
0
0
0
0
100
0
0
100
0
90,91
0
0
9,09
D-loop (nt 14)
A
C
G
T
9,09
0
0
90,91
36,36
9,09
0
54,55
27,27
0
0
18,18
45,45
0
9,09
45,45
3' D-stern (nt 22)
A
C
G
T
9,09
0
0
90,91
0
100
0
0
100
0
0
0
0
9,09
0
90,91
Connector 2 (nt 26)
A
C
G
T
36,36
0
63,64
0
5' Anticodon stern (nt 27)
A
C
G
T
0
0
0
100
0
45,45
0
54,55
0
0
100
0
100
0
0
0
100
0
0
0
Anticodon loop (nt 32)
A
C
G
T
0
0
0
100
0
0
0
100
0
0
100
0
0
100
0
0
100
0
0
0
100
0
0
0
90,91
0
9,09
0
5' Anticodon stern (nt 39)
A
C
G
T
0
0
0
100
0
0
0
100
0
100
0
0
36,36
0
63,64
0
100
0
0
0
Variable region (nt 44)
A
C
G
T
100
0
0
0
0
0
100
0
9,09
0
90,91
0
54,55
0
0
45,45
5' T-stern (nt 49)
A
C
G
T
0
0
100
0
0
45,45
0
54,55
100
0
0
0
0
0
100
0
54,55
36,36
0
9,09
T-loop (nt 54)
A
C
G
T
9,09
9,09
45,45
36,36
63,64
0
0
36,36
45,45
36,36
0
18,18
63,64
9,09
0
18,18
18,18
9,09
9,09
45,45
18,18
36,36
9,09
18,18
9,09
9,09
0
0
9,09
45,45
9,09
36,36
5' T-stern (nt 61)
A
C
G
T
0
27,27
9,09
63,64
0
100
0
0
0
0
0
100
54,55
0
45,45
0
0
100
0
0
3' Accepter sterm (nt 66)
A
C
G
T
0
54,55
0
45,45
54,55
0
45,45
0
45,45
0
54,55
0
9,09
0
90,91
0
45,45
0
54,55
0
0
100
0
0
0
0
0
100
Discriminator base (nt 73)
A
C
G
T
0
0
0
100

Base pairing : Watson Crick (WC), G-T and MisMatch (Mis)
WC (%)GT (%)Mis (%)
54,5545,450
10000
90,919,090
10000
90,919,090
72,7327,270
10000
WC (%)GT (%)Mis (%)
9,0990,910
10000
10000
10000
WC (%)GT (%)Mis (%)
10000
81,8218,180
10000
10000
10000
WC (%)GT (%)Mis (%)
10000
10000
10000
10000
54,55045,45

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