Typical 2D Structure
Cysteine



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D-Loop V-Region T-Loop
Display 2D Consensus Structure
Display Statistical distribution of nucleotides
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Total number of organisms : 17



Statistical distribution of nucleotides (%)

5' Acceptor sterm (nt 1)
A
C
G
T
94,12
0
5,88
0
0
0
100
0
0
82,35
0
17,65
0
70,59
0
29,41
0
94,12
0
5,88
0
64,71
0
35,29
0
0
100
0
Connector 1 (nt 8)
A
C
G
T
94,12
0
0
5,88
17,65
0
82,35
0
5' D-stern (nt 10)
A
C
G
T
0
0
100
0
0
0
0
100
0
0
100
0
88,24
0
11,76
0
D-loop (nt 14)
A
C
G
T
23,53
0
0
76,47
5,88
5,88
0
88,24
5,88
0
0
5,88
17,65
0
17,65
64,71
3' D-stern (nt 22)
A
C
G
T
0
0
0
100
0
100
0
0
100
0
0
0
0
17,65
0
82,35
Connector 2 (nt 26)
A
C
G
T
41,18
0
58,82
0
5' Anticodon stern (nt 27)
A
C
G
T
0
0
0
100
0
0
0
100
5,88
0
94,12
0
94,12
0
5,88
0
100
0
0
0
Anticodon loop (nt 32)
A
C
G
T
0
5,88
0
94,12
0
0
0
100
0
0
100
0
0
100
0
0
100
0
0
0
100
0
0
0
82,35
0
17,65
0
5' Anticodon stern (nt 39)
A
C
G
T
0
0
0
100
0
0
0
100
0
94,12
0
5,88
64,71
0
35,29
0
100
0
0
0
Variable region (nt 44)
A
C
G
T
100
0
0
0
0
0
100
0
41,18
0
58,82
0
100
0
0
0
5' T-stern (nt 49)
A
C
G
T
0
0
100
0
0
100
0
0
100
0
0
0
0
0
100
0
0
76,47
0
23,53
T-loop (nt 54)
A
C
G
T
0
5,88
0
94,12
5,88
5,88
0
88,24
5,88
58,82
5,88
29,41
94,12
0
5,88
0
82,35
0
11,76
5,88
41,18
0
23,53
35,29
0
5,88
23,53
11,76
0
0
0
11,76
23,53
5,88
11,76
58,82
5' T-stern (nt 61)
A
C
G
T
0
41,18
5,88
52,94
0
100
0
0
0
0
0
100
0
0
100
0
0
100
0
0
3' Accepter sterm (nt 66)
A
C
G
T
0
100
0
0
0
0
100
0
0
0
100
0
0
0
100
0
5,88
0
94,12
0
0
100
0
0
0
0
0
100
Discriminator base (nt 73)
A
C
G
T
0
0
0
100

Base pairing : Watson Crick (WC), G-T and MisMatch (Mis)
WC (%)GT (%)Mis (%)
94,125,880
10000
88,2411,760
70,5929,410
94,125,880
64,7135,290
10000
WC (%)GT (%)Mis (%)
17,6582,350
10000
10000
88,2411,760
WC (%)GT (%)Mis (%)
10000
64,7135,290
10000
94,125,880
10000
WC (%)GT (%)Mis (%)
10000
10000
10000
10000
5,88094,12

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