Typical 2D Structure
Cysteine



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D-Loop V-Region T-Loop
Display 2D Consensus Structure
Display Statistical distribution of nucleotides
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Total number of organisms : 34



Statistical distribution of nucleotides (%)

5' Acceptor sterm (nt 1)
A
C
G
T
82,35
0
17,65
0
0
0
100
0
0
73,53
0
26,47
0
82,35
0
17,65
0
76,47
0
23,53
0
38,24
0
61,76
14,71
0
85,29
0
Connector 1 (nt 8)
A
C
G
T
97,06
0
0
2,94
8,82
0
91,18
0
5' D-stern (nt 10)
A
C
G
T
0
0
100
0
0
0
0
100
0
0
100
0
85,29
0
11,76
2,94
D-loop (nt 14)
A
C
G
T
20,59
0
2,94
76,47
17,65
5,88
8,82
67,65
32,35
0
5,88
61,76
20,59
2,94
5,88
8,82
0
0
0
2,94
35,29
0
11,76
52,94
3' D-stern (nt 22)
A
C
G
T
5,88
2,94
0
91,18
0
100
0
0
100
0
0
0
0
14,71
0
85,29
Connector 2 (nt 26)
A
C
G
T
38,24
0
61,76
0
5' Anticodon stern (nt 27)
A
C
G
T
0
0
0
100
0
17,65
0
82,35
2,94
0
97,06
0
97,06
0
2,94
0
100
0
0
0
Anticodon loop (nt 32)
A
C
G
T
0
2,94
0
97,06
0
0
0
100
0
0
100
0
0
100
0
0
100
0
0
0
100
0
0
0
88,24
0
11,76
0
5' Anticodon stern (nt 39)
A
C
G
T
0
0
0
100
0
0
0
100
0
97,06
0
2,94
58,82
0
41,18
0
97,06
0
2,94
0
Variable region (nt 44)
A
C
G
T
100
0
0
0
2,94
0
97,06
0
29,41
0
70,59
0
85,29
0
0
14,71
5' T-stern (nt 49)
A
C
G
T
0
0
100
0
0
82,35
0
17,65
100
0
0
0
0
0
100
0
17,65
67,65
0
14,71
T-loop (nt 54)
A
C
G
T
2,94
5,88
14,71
76,47
23,53
2,94
0
73,53
17,65
58,82
2,94
20,59
85,29
2,94
2,94
5,88
64,71
2,94
8,82
17,65
29,41
17,65
14,71
32,35
2,94
5,88
14,71
11,76
0
0
0
5,88
17,65
23,53
8,82
50
5' T-stern (nt 61)
A
C
G
T
0
35,29
5,88
58,82
0
100
0
0
0
0
0
100
17,65
0
82,35
0
0
100
0
0
3' Accepter sterm (nt 66)
A
C
G
T
0
85,29
0
14,71
17,65
0
82,35
0
14,71
0
85,29
0
2,94
0
97,06
0
17,65
0
82,35
0
0
100
0
0
0
0
0
100
Discriminator base (nt 73)
A
C
G
T
0
0
0
100

Base pairing : Watson Crick (WC), G-T and MisMatch (Mis)
WC (%)GT (%)Mis (%)
82,3517,650
10000
91,188,820
85,2914,710
91,188,820
55,8844,120
10000
WC (%)GT (%)Mis (%)
14,7185,290
10000
10000
91,185,882,94
WC (%)GT (%)Mis (%)
97,062,940
76,4723,530
10000
97,062,940
10000
WC (%)GT (%)Mis (%)
10000
10000
10000
10000
20,59079,41

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