Typical 2D Structure
Cysteine



Choose an amino acid :
See or
D-Loop V-Region T-Loop
Display 2D Consensus Structure
Display Statistical distribution of nucleotides
Back to Sequence alignment   Print preview
Press the reload button if the figure is not displayed correctly.

Total number of organisms : 9



Statistical distribution of nucleotides (%)

5' Acceptor sterm (nt 1)
A
C
G
T
66,67
0
33,33
0
0
0
100
0
0
88,89
0
11,11
0
100
0
0
0
44,44
0
55,56
0
22,22
0
77,78
0
0
100
0
Connector 1 (nt 8)
A
C
G
T
0
0
0
100
55,56
0
44,44
0
5' D-stern (nt 10)
A
C
G
T
0
0
100
0
0
0
0
100
0
0
100
0
0
0
0
100
D-loop (nt 14)
A
C
G
T
66,67
0
0
33,33
44,44
0
0
55,56
33,33
11,11
11,11
44,44
11,11
22,22
33,33
0
22,22
0
0
11,11
33,33
0
22,22
44,44
3' D-stern (nt 22)
A
C
G
T
88,89
0
0
11,11
0
100
0
0
100
0
0
0
0
77,78
0
22,22
Connector 2 (nt 26)
A
C
G
T
44,44
0
55,56
0
5' Anticodon stern (nt 27)
A
C
G
T
0
11,11
0
88,89
0
33,33
0
66,67
0
0
100
0
100
0
0
0
100
0
0
0
Anticodon loop (nt 32)
A
C
G
T
0
0
0
100
0
0
0
100
0
0
100
0
0
100
0
0
100
0
0
0
100
0
0
0
100
0
0
0
5' Anticodon stern (nt 39)
A
C
G
T
0
0
0
100
0
0
0
100
0
100
0
0
44,44
0
55,56
0
77,78
0
22,22
0
Variable region (nt 44)
A
C
G
T
100
0
0
0
0
0
100
0
100
0
0
0
88,89
0
11,11
0
5' T-stern (nt 49)
A
C
G
T
0
0
100
0
0
100
0
0
100
0
0
0
0
0
100
0
0
100
0
0
T-loop (nt 54)
A
C
G
T
0
0
0
100
0
0
0
100
11,11
77,78
0
11,11
100
0
0
0
88,89
0
0
0
11,11
11,11
0
77,78
5' T-stern (nt 61)
A
C
G
T
0
88,89
0
11,11
0
100
0
0
0
0
0
100
0
0
100
0
0
100
0
0
3' Accepter sterm (nt 66)
A
C
G
T
0
100
0
0
0
22,22
77,78
0
0
22,22
77,78
0
0
0
100
0
0
0
100
0
0
100
0
0
0
0
0
100
Discriminator base (nt 73)
A
C
G
T
0
0
0
100

Base pairing : Watson Crick (WC), G-T and MisMatch (Mis)
WC (%)GT (%)Mis (%)
66,6733,330
10000
88,8911,110
10000
44,4433,3322,22
22,2255,5622,22
10000
WC (%)GT (%)Mis (%)
77,7822,220
10000
10000
88,89011,11
WC (%)GT (%)Mis (%)
88,8911,110
77,7822,220
10000
10000
10000
WC (%)GT (%)Mis (%)
10000
10000
10000
10000
00100

Top