Typical 2D Structure
Cysteine



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D-Loop V-Region T-Loop
Display 2D Consensus Structure
Display Statistical distribution of nucleotides
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Total number of organisms : 78



Statistical distribution of nucleotides (%)

5' Acceptor sterm (nt 1)
A
C
G
T
78,21
0
21,79
0
0
0
100
0
0
38,46
0
61,54
0
84,62
0
15,38
0
83,33
0
16,67
0
10,26
0
89,74
0
0
100
0
Connector 1 (nt 8)
A
C
G
T
3,85
2,56
0
93,59
26,92
0
73,08
0
5' D-stern (nt 10)
A
C
G
T
0
0
100
0
0
0
0
100
1,28
0
98,72
0
80,77
1,28
1,28
16,67
D-loop (nt 14)
A
C
G
T
87,18
0
5,13
7,69
21,79
3,85
2,56
71,79
32,05
3,85
19,23
43,59
35,9
2,56
16,67
17,95
2,56
0
0
1,28
41,03
0
23,08
35,9
3' D-stern (nt 22)
A
C
G
T
25,64
0
1,28
73,08
0
98,72
0
1,28
100
0
0
0
0
30,77
0
69,23
Connector 2 (nt 26)
A
C
G
T
32,05
0
42,31
25,64
5' Anticodon stern (nt 27)
A
C
G
T
1,28
1,28
0
97,44
0
3,85
0
96,15
0
0
100
0
100
0
0
0
100
0
0
0
Anticodon loop (nt 32)
A
C
G
T
0
0
0
100
0
0
0
100
0
2,56
97,44
0
0
97,44
2,56
0
100
0
0
0
98,72
1,28
0
0
97,44
0
2,56
0
5' Anticodon stern (nt 39)
A
C
G
T
0
0
0
100
0
0
0
100
0
100
0
0
89,74
0
7,69
2,56
89,74
0
10,26
0
Variable region (nt 44)
A
C
G
T
82,05
0
17,95
0
0
0
100
0
89,74
0
10,26
0
98,72
0
1,28
0
5' T-stern (nt 49)
A
C
G
T
0
0
100
0
0
98,72
0
1,28
100
0
0
0
0
0
100
0
6,41
92,31
0
1,28
T-loop (nt 54)
A
C
G
T
1,28
3,85
0
94,87
3,85
0
0
96,15
3,85
85,9
2,56
7,69
93,59
1,28
5,13
0
94,87
2,56
0
2,56
30,77
10,26
1,28
51,28
0
0
0
1,28
3,85
26,92
1,28
67,95
5' T-stern (nt 61)
A
C
G
T
1,28
43,59
8,97
46,15
0
98,72
0
1,28
0
1,28
0
98,72
0
0
100
0
0
100
0
0
3' Accepter sterm (nt 66)
A
C
G
T
0
100
0
0
2,56
2,56
94,87
0
1,28
2,56
96,15
0
0
0
100
0
30,77
0
69,23
0
0
97,44
1,28
1,28
0
1,28
0
98,72
Discriminator base (nt 73)
A
C
G
T
0
1,28
0
98,72

Base pairing : Watson Crick (WC), G-T and MisMatch (Mis)
WC (%)GT (%)Mis (%)
79,4920,510
97,441,281,28
69,2330,770
84,6215,380
84,6212,822,56
12,8284,622,56
10000
WC (%)GT (%)Mis (%)
30,7769,230
10000
10000
85,9014,1
WC (%)GT (%)Mis (%)
89,748,971,28
93,593,852,56
10000
10000
10000
WC (%)GT (%)Mis (%)
10000
98,721,280
98,7201,28
98,721,280
8,971,2889,74

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