Typical 2D Structure
Glutamine



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D-Loop V-Region T-Loop
Display 2D Consensus Structure
Display Statistical distribution of nucleotides
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Total number of organisms : 33



Statistical distribution of nucleotides (%)

5' Acceptor sterm (nt 1)
A
C
G
T
0
0
0
100
96,97
0
3,03
0
0
0
100
0
51,52
0
48,48
0
84,85
0
15,15
0
0
15,15
0
84,85
42,42
0
39,39
18,18
Connector 1 (nt 8)
A
C
G
T
12,12
0
42,42
45,45
21,21
0
75,76
3,03
5' D-stern (nt 10)
A
C
G
T
0
0
100
0
0
0
0
100
0
0
100
0
0
3,03
0
96,97
D-loop (nt 14)
A
C
G
T
57,58
0
36,36
6,06
51,52
3,03
6,06
39,39
18,18
6,06
12,12
63,64
30,3
0
51,52
18,18
3,03
0
90,91
6,06
3,03
0
72,73
24,24
18,18
0
15,15
66,67
45,45
0
27,27
6,06
0
0
0
6,06
75,76
0
24,24
0
3' D-stern (nt 22)
A
C
G
T
0
0
100
0
0
100
0
0
100
0
0
0
0
100
0
0
Connector 2 (nt 26)
A
C
G
T
3,03
0
96,97
0
5' Anticodon stern (nt 27)
A
C
G
T
36,36
0
63,64
0
93,94
0
6,06
0
0
0
100
0
84,85
0
15,15
0
87,88
0
6,06
6,06
Anticodon loop (nt 32)
A
C
G
T
9,09
6,06
15,15
69,7
0
0
0
100
0
0
0
100
0
0
0
100
0
0
100
0
54,55
0
45,45
0
66,67
0
33,33
0
5' Anticodon stern (nt 39)
A
C
G
T
3,03
0
0
96,97
0
6,06
0
93,94
0
100
0
0
0
3,03
0
96,97
0
51,52
0
48,48
Variable region (nt 44)
A
C
G
T
90,91
0
3,03
6,06
33,33
0
66,67
0
0
0
100
0
33,33
0
48,48
18,18
5' T-stern (nt 49)
A
C
G
T
30,3
0
57,58
12,12
3,03
6,06
0
90,91
66,67
0
33,33
0
3,03
0
96,97
0
0
0
100
0
T-loop (nt 54)
A
C
G
T
0
0
0
100
0
0
0
100
0
100
0
0
51,52
0
48,48
0
100
0
0
0
3,03
9,09
24,24
63,64
12,12
9,09
18,18
60,61
5' T-stern (nt 61)
A
C
G
T
0
100
0
0
0
87,88
0
12,12
0
24,24
0
75,76
81,82
0
15,15
3,03
6,06
12,12
6,06
75,76
3' Accepter sterm (nt 66)
A
C
G
T
57,58
0
24,24
18,18
36,36
0
63,64
0
0
12,12
0
87,88
0
39,39
0
60,61
0
96,97
0
3,03
0
3,03
0
96,97
100
0
0
0
Discriminator base (nt 73)
A
C
G
T
0
0
100
0

Base pairing : Watson Crick (WC), G-T and MisMatch (Mis)
WC (%)GT (%)Mis (%)
10000
10000
96,973,030
90,919,090
90,916,063,03
51,5248,480
21,219,0969,7
WC (%)GT (%)Mis (%)
10000
10000
10000
3,0396,970
WC (%)GT (%)Mis (%)
87,8812,120
96,973,030
10000
90,919,090
90,916,063,03
WC (%)GT (%)Mis (%)
36,3639,3924,24
90,919,090
90,919,090
90,919,090
10000

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