Typical 2D Structure
Histidine



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D-Loop V-Region T-Loop
Display 2D Consensus Structure
Display Statistical distribution of nucleotides
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Total number of organisms : 11



Statistical distribution of nucleotides (%)

5' Acceptor sterm (nt 1)
A
C
G
T
0
0
100
0
0
0
0
100
63,64
9,09
27,27
0
72,73
0
27,27
0
81,82
0
0
18,18
0
9,09
0
90,91
100
0
0
0
Connector 1 (nt 8)
A
C
G
T
0
0
0
100
100
0
0
0
5' D-stern (nt 10)
A
C
G
T
0
0
100
0
0
0
0
100
0
0
0
100
0
0
0
100
D-loop (nt 14)
A
C
G
T
100
0
0
0
45,45
45,45
0
9,09
63,64
27,27
0
9,09
81,82
18,18
0
0
100
0
0
0
3' D-stern (nt 22)
A
C
G
T
100
0
0
0
100
0
0
0
100
0
0
0
0
90,91
0
9,09
Connector 2 (nt 26)
A
C
G
T
100
0
0
0
5' Anticodon stern (nt 27)
A
C
G
T
0
18,18
0
81,82
0
18,18
0
81,82
100
0
0
0
0
0
100
0
100
0
0
0
Anticodon loop (nt 32)
A
C
G
T
0
72,73
0
27,27
0
0
0
100
0
0
100
0
0
0
0
100
0
0
100
0
100
0
0
0
100
0
0
0
5' Anticodon stern (nt 39)
A
C
G
T
0
0
0
100
0
100
0
0
0
0
0
100
54,55
0
36,36
9,09
90,91
0
9,09
0
Variable region (nt 44)
A
C
G
T
27,27
54,55
0
18,18
90,91
0
9,09
0
100
0
0
0
0
36,36
0
63,64
5' T-stern (nt 49)
A
C
G
T
100
0
0
0
18,18
0
81,82
0
45,45
0
54,55
0
100
0
0
0
45,45
0
45,45
9,09
T-loop (nt 54)
A
C
G
T
100
0
0
0
0
27,27
0
72,73
54,55
18,18
0
27,27
72,73
9,09
0
18,18
72,73
0
0
27,27
45,45
45,45
0
9,09
9,09
9,09
0
18,18
9,09
0
0
0
18,18
54,55
0
27,27
5' T-stern (nt 61)
A
C
G
T
9,09
72,73
0
18,18
0
9,09
0
90,91
0
54,55
0
45,45
0
81,82
0
18,18
0
0
0
100
3' Accepter sterm (nt 66)
A
C
G
T
0
0
0
100
81,82
0
18,18
0
9,09
0
0
90,91
0
9,09
0
90,91
0
27,27
0
72,73
100
0
0
0
0
100
0
0
Discriminator base (nt 73)
A
C
G
T
0
100
0
0

Base pairing : Watson Crick (WC), G-T and MisMatch (Mis)
WC (%)GT (%)Mis (%)
10000
10000
90,9109,09
81,8218,180
90,9109,09
90,919,090
10000
WC (%)GT (%)Mis (%)
90,919,090
10000
10000
10000
WC (%)GT (%)Mis (%)
90,9109,09
63,6427,279,09
10000
10000
10000
WC (%)GT (%)Mis (%)
10000
10000
10000
90,9109,09
72,73027,27

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