Typical 2D Structure
Histidine



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D-Loop V-Region T-Loop
Display 2D Consensus Structure
Display Statistical distribution of nucleotides
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Total number of organisms : 33



Statistical distribution of nucleotides (%)

5' Acceptor sterm (nt 1)
A
C
G
T
0
0
100
0
0
0
0
100
87,88
3,03
9,09
0
72,73
0
27,27
0
90,91
3,03
0
6,06
0
15,15
0
84,85
100
0
0
0
Connector 1 (nt 8)
A
C
G
T
0
0
0
100
100
0
0
0
5' D-stern (nt 10)
A
C
G
T
6,06
0
93,94
0
0
0
0
100
0
0
0
100
0
0
0
100
D-loop (nt 14)
A
C
G
T
100
0
0
0
78,79
15,15
3,03
3,03
42,42
42,42
0
15,15
36,36
42,42
0
18,18
100
0
0
0
3' D-stern (nt 22)
A
C
G
T
100
0
0
0
100
0
0
0
100
0
0
0
0
90,91
0
9,09
Connector 2 (nt 26)
A
C
G
T
93,94
0
6,06
0
5' Anticodon stern (nt 27)
A
C
G
T
0
18,18
0
81,82
0
24,24
0
75,76
100
0
0
0
3,03
0
96,97
0
96,97
0
3,03
0
Anticodon loop (nt 32)
A
C
G
T
0
33,33
0
66,67
0
3,03
0
96,97
0
0
100
0
0
0
0
100
0
0
100
0
100
0
0
0
93,94
0
6,06
0
5' Anticodon stern (nt 39)
A
C
G
T
0
6,06
0
93,94
0
100
0
0
0
3,03
0
96,97
69,7
0
27,27
3,03
84,85
0
15,15
0
Variable region (nt 44)
A
C
G
T
18,18
45,45
0
36,36
81,82
9,09
3,03
6,06
96,97
0
0
3,03
0
30,3
0
69,7
5' T-stern (nt 49)
A
C
G
T
100
0
0
0
6,06
0
93,94
0
72,73
0
27,27
0
66,67
0
33,33
0
30,3
6,06
60,61
3,03
T-loop (nt 54)
A
C
G
T
42,42
51,52
0
6,06
0
30,3
0
69,7
33,33
30,3
0
36,36
75,76
6,06
9,09
9,09
45,45
42,42
0
12,12
51,52
36,36
9,09
3,03
45,45
18,18
3,03
9,09
3,03
0
0
0
51,52
33,33
3,03
12,12
5' T-stern (nt 61)
A
C
G
T
3,03
81,82
0
15,15
0
39,39
0
60,61
0
42,42
0
57,58
0
93,94
0
6,06
0
0
0
100
3' Accepter sterm (nt 66)
A
C
G
T
0
0
0
100
84,85
0
15,15
0
6,06
3,03
0
90,91
0
18,18
0
81,82
0
12,12
0
87,88
100
0
0
0
0
100
0
0
Discriminator base (nt 73)
A
C
G
T
0
100
0
0

Base pairing : Watson Crick (WC), G-T and MisMatch (Mis)
WC (%)GT (%)Mis (%)
10000
10000
93,9406,06
84,8512,123,03
90,9109,09
93,943,033,03
10000
WC (%)GT (%)Mis (%)
96,973,030
10000
10000
10000
WC (%)GT (%)Mis (%)
96,9703,03
84,859,096,06
96,9703,03
96,9703,03
96,9703,03
WC (%)GT (%)Mis (%)
10000
10000
84,85015,15
93,9406,06
72,733,0324,24

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