Typical 2D Structure
Histidine



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D-Loop V-Region T-Loop
Display 2D Consensus Structure
Display Statistical distribution of nucleotides
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Total number of organisms : 35



Statistical distribution of nucleotides (%)

5' Acceptor sterm (nt 1)
A
C
G
T
0
0
100
0
0
0
0
100
97,14
0
2,86
0
91,43
0
8,57
0
48,57
0
51,43
0
0
5,71
0
94,29
97,14
0
2,86
0
Connector 1 (nt 8)
A
C
G
T
0
0
0
100
100
0
0
0
5' D-stern (nt 10)
A
C
G
T
5,71
0
94,29
0
0
0
0
100
0
0
0
100
0
0
0
100
D-loop (nt 14)
A
C
G
T
100
0
0
0
100
0
0
0
51,43
14,29
22,86
11,43
91,43
2,86
2,86
2,86
0
0
0
2,86
100
0
0
0
3' D-stern (nt 22)
A
C
G
T
88,57
0
11,43
0
85,71
0
14,29
0
97,14
2,86
0
0
0
80
0
20
Connector 2 (nt 26)
A
C
G
T
85,71
2,86
8,57
2,86
5' Anticodon stern (nt 27)
A
C
G
T
0
31,43
0
68,57
0
0
0
100
100
0
0
0
0
0
100
0
34,29
8,57
2,86
54,29
Anticodon loop (nt 32)
A
C
G
T
0
8,57
0
91,43
0
5,71
0
94,29
0
0
100
0
0
0
0
100
0
0
100
0
88,57
0
11,43
0
91,43
2,86
5,71
0
5' Anticodon stern (nt 39)
A
C
G
T
45,71
2,86
17,14
34,29
0
100
0
0
0
5,71
0
94,29
97,14
0
2,86
0
68,57
2,86
28,57
0
Variable region (nt 44)
A
C
G
T
8,57
65,71
0
25,71
80
0
20
0
97,14
0
2,86
0
0
22,86
0
77,14
5' T-stern (nt 49)
A
C
G
T
100
0
0
0
2,86
0
97,14
0
94,29
0
5,71
0
97,14
0
2,86
0
20
0
80
0
T-loop (nt 54)
A
C
G
T
62,86
22,86
5,71
8,57
0
42,86
0
57,14
17,14
51,43
0
31,43
82,86
2,86
5,71
8,57
74,29
2,86
0
22,86
82,86
5,71
0
11,43
62,86
17,14
2,86
11,43
0
0
2,86
0
51,43
37,14
2,86
8,57
5' T-stern (nt 61)
A
C
G
T
2,86
94,29
0
2,86
0
2,86
0
97,14
0
8,57
0
91,43
0
97,14
0
2,86
0
0
0
100
3' Accepter sterm (nt 66)
A
C
G
T
0
2,86
0
97,14
97,14
0
2,86
0
0
54,29
0
45,71
0
11,43
0
88,57
0
0
0
100
100
0
0
0
0
100
0
0
Discriminator base (nt 73)
A
C
G
T
0
100
0
0

Base pairing : Watson Crick (WC), G-T and MisMatch (Mis)
WC (%)GT (%)Mis (%)
10000
10000
97,142,860
97,1402,86
97,1402,86
91,432,865,71
94,292,862,86
WC (%)GT (%)Mis (%)
85,7114,290
97,1402,86
85,7114,290
88,5711,430
WC (%)GT (%)Mis (%)
91,432,865,71
97,142,860
94,2905,71
10000
91,438,570
WC (%)GT (%)Mis (%)
10000
10000
97,1402,86
94,292,862,86
77,142,8620

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