Typical 2D Structure
Leucine UUR



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D-Loop V-Region T-Loop
Display 2D Consensus Structure
Display Statistical distribution of nucleotides
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Total number of organisms : 9



Statistical distribution of nucleotides (%)

5' Acceptor sterm (nt 1)
A
C
G
T
0
0
100
0
0
0
0
100
0
0
0
100
100
0
0
0
11,11
0
88,89
0
0
0
100
0
0
0
100
0
Connector 1 (nt 8)
A
C
G
T
0
0
0
100
0
0
88,89
0
5' D-stern (nt 10)
A
C
G
T
0
11,11
88,89
0
11,11
88,89
0
0
88,89
0
11,11
0
11,11
0
88,89
0
D-loop (nt 14)
A
C
G
T
77,78
0
22,22
0
0
11,11
88,89
0
0
100
0
0
0
100
0
0
0
66,67
33,33
0
0
0
100
0
0
22,22
66,67
11,11
33,33
11,11
0
55,56
33,33
0
33,33
0
100
0
0
0
3' D-stern (nt 22)
A
C
G
T
0
33,33
0
66,67
0
0
0
100
0
0
100
0
0
100
0
0
Connector 2 (nt 26)
A
C
G
T
88,89
0
11,11
0
5' Anticodon stern (nt 27)
A
C
G
T
0
0
0
100
100
0
0
0
100
0
0
0
100
0
0
0
100
0
0
0
Anticodon loop (nt 32)
A
C
G
T
0
100
0
0
0
0
0
100
0
0
0
100
100
0
0
0
100
0
0
0
77,78
0
22,22
0
0
100
0
0
5' Anticodon stern (nt 39)
A
C
G
T
0
66,67
0
33,33
0
0
0
100
0
0
0
100
0
0
0
100
100
0
0
0
Variable region (nt 44)
A
C
G
T
0
22,22
0
77,78
33,33
33,33
0
33,33
33,33
44,44
0
22,22
0
22,22
0
77,78
0
100
0
0
5' T-stern (nt 49)
A
C
G
T
100
0
0
0
0
0
100
0
100
0
0
0
0
0
100
0
0
0
100
0
T-loop (nt 54)
A
C
G
T
0
0
0
100
0
0
0
100
0
100
0
0
100
0
0
0
100
0
0
0
33,33
33,33
0
33,33
0
0
0
100
5' T-stern (nt 61)
A
C
G
T
0
100
0
0
0
100
0
0
0
0
0
100
0
100
0
0
0
0
0
100
3' Accepter sterm (nt 66)
A
C
G
T
0
100
0
0
0
100
0
0
0
77,78
0
22,22
0
0
0
100
100
0
0
0
100
0
0
0
0
88,89
0
11,11
Discriminator base (nt 73)
A
C
G
T
100
0
0
0

Base pairing : Watson Crick (WC), G-T and MisMatch (Mis)
WC (%)GT (%)Mis (%)
88,8911,110
10000
10000
10000
88,8911,110
10000
10000
WC (%)GT (%)Mis (%)
88,89011,11
88,89011,11
88,8911,110
44,4455,560
WC (%)GT (%)Mis (%)
10000
10000
10000
10000
33,33066,67
WC (%)GT (%)Mis (%)
10000
10000
10000
10000
10000

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