Typical 2D Structure
Proline



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D-Loop V-Region T-Loop
Display 2D Consensus Structure
Display Statistical distribution of nucleotides
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Total number of organisms : 9



Statistical distribution of nucleotides (%)

5' Acceptor sterm (nt 1)
A
C
G
T
0
100
0
0
100
0
0
0
11,11
0
88,89
0
11,11
0
88,89
0
44,44
0
55,56
0
88,89
0
11,11
0
33,33
0
66,67
0
Connector 1 (nt 8)
A
C
G
T
0
0
0
100
100
0
0
0
5' D-stern (nt 10)
A
C
G
T
0
0
100
0
0
0
0
100
0
0
0
100
0
0
0
100
D-loop (nt 14)
A
C
G
T
100
0
0
0
88,89
0
0
11,11
11,11
0
44,44
44,44
55,56
0
11,11
33,33
100
0
0
0
3' D-stern (nt 22)
A
C
G
T
0
0
100
0
100
0
0
0
100
0
0
0
0
0
0
100
Connector 2 (nt 26)
A
C
G
T
55,56
0
11,11
33,33
5' Anticodon stern (nt 27)
A
C
G
T
0
11,11
0
88,89
0
88,89
0
11,11
88,89
0
11,11
0
0
0
100
0
0
77,78
0
22,22
Anticodon loop (nt 32)
A
C
G
T
0
0
0
100
0
0
0
100
0
0
0
100
0
0
100
0
0
0
100
0
0
0
100
0
0
0
0
100
5' Anticodon stern (nt 39)
A
C
G
T
22,22
0
77,78
0
0
44,44
0
55,56
0
11,11
0
88,89
11,11
0
88,89
0
77,78
0
22,22
0
Variable region (nt 44)
A
C
G
T
0
0
11,11
88,89
22,22
0
77,78
0
0
0
100
0
0
22,22
0
77,78
5' T-stern (nt 49)
A
C
G
T
11,11
0
88,89
0
33,33
0
66,67
0
11,11
0
88,89
0
22,22
0
77,78
0
0
33,33
0
66,67
T-loop (nt 54)
A
C
G
T
44,44
0
11,11
44,44
33,33
0
44,44
22,22
33,33
0
44,44
22,22
22,22
0
33,33
44,44
0
0
22,22
0
33,33
0
33,33
33,33
5' T-stern (nt 61)
A
C
G
T
44,44
0
44,44
11,11
0
77,78
0
22,22
0
66,67
0
33,33
0
22,22
0
77,78
0
44,44
0
55,56
3' Accepter sterm (nt 66)
A
C
G
T
0
44,44
0
55,56
0
0
0
100
0
55,56
0
44,44
0
88,89
0
11,11
0
88,89
0
11,11
0
0
0
100
0
0
100
0
Discriminator base (nt 73)
A
C
G
T
100
0
0
0

Base pairing : Watson Crick (WC), G-T and MisMatch (Mis)
WC (%)GT (%)Mis (%)
10000
10000
10000
10000
10000
88,8911,110
77,7822,220
WC (%)GT (%)Mis (%)
01000
10000
10000
01000
WC (%)GT (%)Mis (%)
88,8911,110
10000
10000
44,4455,560
10000
WC (%)GT (%)Mis (%)
55,5644,440
55,5644,440
77,7822,220
10000
77,7811,1111,11

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