Typical 2D Structure
Serine AGY



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D-Loop V-Region T-Loop
Display 2D Consensus Structure
Display Statistical distribution of nucleotides
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Total number of organisms : 8



Statistical distribution of nucleotides (%)

5' Acceptor sterm (nt 1)
A
C
G
T
25
0
75
0
100
0
0
0
62,5
0
37,5
0
100
0
0
0
100
0
0
0
100
0
0
0
0
0
100
0
Connector 1 (nt 8)
A
C
G
T
12,5
0
0
87,5
100
0
0
0
0
12,5
0
87,5
12,5
0
87,5
0
5' D-stern (nt 10)
A
C
G
T
D-loop (nt 14)
A
C
G
T
3' D-stern (nt 22)
A
C
G
T
Connector 2 (nt 26)
A
C
G
T
5' Anticodon stern (nt 27)
A
C
G
T
0
100
0
0
100
0
0
0
100
0
0
0
0
0
100
0
87,5
0
12,5
0
87,5
0
12,5
0
Anticodon loop (nt 32)
A
C
G
T
0
100
0
0
0
0
0
100
0
0
100
0
0
100
0
0
0
0
0
100
100
0
0
0
100
0
0
0
5' Anticodon stern (nt 39)
A
C
G
T
0
75
0
25
0
0
0
100
0
100
0
0
100
0
0
0
0
0
0
100
0
0
87,5
0
Variable region (nt 44)
A
C
G
T
0
75
12,5
12,5
12,5
62,5
12,5
12,5
0
0
12,5
0
50
25
0
25
5' T-stern (nt 49)
A
C
G
T
0
100
0
0
0
100
0
0
62,5
0
37,5
0
0
12,5
0
87,5
37,5
0
62,5
0
T-loop (nt 54)
A
C
G
T
0
37,5
0
62,5
25
50
0
25
0
0
0
100
87,5
0
12,5
0
100
0
0
0
50
50
0
0
87,5
0
0
0
50
12,5
37,5
0
5' T-stern (nt 61)
A
C
G
T
0
62,5
0
37,5
87,5
0
12,5
0
0
37,5
0
62,5
0
0
100
0
0
0
100
0
3' Accepter sterm (nt 66)
A
C
G
T
0
100
0
0
0
0
0
100
0
0
0
100
0
0
0
100
0
25
0
75
0
0
0
100
0
75
0
25
Discriminator base (nt 73)
A
C
G
T
50
0
25
25

Base pairing : Watson Crick (WC), G-T and MisMatch (Mis)
WC (%)GT (%)Mis (%)
10000
10000
87,512,50
10000
10000
10000
10000
WC (%)GT (%)Mis (%)
WC (%)GT (%)Mis (%)
87,500
87,500
0087,5
87,500
87,500
25062,5
WC (%)GT (%)Mis (%)
10000
10000
10000
10000
10000

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