Typical 2D Structure
Serine AGY



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D-Loop V-Region T-Loop
Display 2D Consensus Structure
Display Statistical distribution of nucleotides
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Total number of organisms : 36



Statistical distribution of nucleotides (%)

5' Acceptor sterm (nt 1)
A
C
G
T
0
0
100
0
97,22
0
2,78
0
94,44
0
5,56
0
100
0
0
0
100
0
0
0
100
0
0
0
0
0
100
0
Connector 1 (nt 8)
A
C
G
T
2,78
11,11
0
86,11
88,89
0
0
11,11
2,78
41,67
0
55,56
13,89
19,44
27,78
36,11
0
0
61,11
0
5' D-stern (nt 10)
A
C
G
T
D-loop (nt 14)
A
C
G
T
3' D-stern (nt 22)
A
C
G
T
Connector 2 (nt 26)
A
C
G
T
5' Anticodon stern (nt 27)
A
C
G
T
0
91,67
0
8,33
97,22
0
2,78
0
91,67
0
8,33
0
0
0
100
0
100
0
0
0
97,22
0
2,78
0
Anticodon loop (nt 32)
A
C
G
T
0
100
0
0
0
0
0
100
0
0
100
0
0
100
0
0
0
0
0
100
100
0
0
0
100
0
0
0
5' Anticodon stern (nt 39)
A
C
G
T
0
44,44
0
55,56
0
5,56
0
94,44
0
100
0
0
66,67
13,89
0
19,44
16,67
8,33
0
75
8,33
0
75
16,67
Variable region (nt 44)
A
C
G
T
2,78
72,22
16,67
8,33
8,33
33,33
2,78
55,56
8,33
11,11
0
16,67
2,78
63,89
0
30,56
5' T-stern (nt 49)
A
C
G
T
0
100
0
0
0
100
0
0
86,11
2,78
11,11
0
0
52,78
0
47,22
72,22
0
27,78
0
T-loop (nt 54)
A
C
G
T
0
75
0
25
5,56
77,78
2,78
13,89
0
0
0
100
94,44
0
5,56
0
100
0
0
0
2,78
66,67
0
30,56
97,22
2,78
0
0
19,44
0
16,67
0
33,33
33,33
30,56
2,78
5' T-stern (nt 61)
A
C
G
T
0
25
0
75
44,44
0
55,56
0
0
8,33
0
91,67
0
0
100
0
0
0
100
0
3' Accepter sterm (nt 66)
A
C
G
T
0
100
0
0
0
0
0
100
0
2,78
0
97,22
0
0
0
100
0
5,56
0
94,44
0
2,78
0
97,22
0
94,44
0
5,56
Discriminator base (nt 73)
A
C
G
T
77,78
0
19,44
2,78

Base pairing : Watson Crick (WC), G-T and MisMatch (Mis)
WC (%)GT (%)Mis (%)
94,445,560
94,442,782,78
10000
10000
97,2202,78
10000
10000
WC (%)GT (%)Mis (%)
WC (%)GT (%)Mis (%)
83,33016,67
77,78022,22
27,78072,22
10000
94,4405,56
58,33041,67
WC (%)GT (%)Mis (%)
10000
10000
94,442,782,78
97,222,780
97,222,780

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