Typical 2D Structure
Serine UCN



Choose an amino acid :
See or
D-Loop V-Region T-Loop
Display 2D Consensus Structure
Display Statistical distribution of nucleotides
Back to Sequence alignment   Print preview
Press the reload button if the figure is not displayed correctly.

Total number of organisms : 18



Statistical distribution of nucleotides (%)

5' Acceptor sterm (nt 1)
A
C
G
T
5,56
0
94,44
0
100
0
0
0
0
0
100
0
94,44
0
5,56
0
100
0
0
0
100
0
0
0
0
0
100
0
Connector 1 (nt 8)
A
C
G
T
0
0
0
100
5' D-stern (nt 10)
A
C
G
T
0
100
0
0
100
0
0
0
0
0
0
100
100
0
0
0
D-loop (nt 14)
A
C
G
T
33,33
0
66,67
0
83,33
0
11,11
5,56
0
0
100
0
0
0
100
0
5,56
0
0
94,44
3' D-stern (nt 22)
A
C
G
T
0
0
0
100
100
0
0
0
0
0
0
100
0
0
100
0
Connector 2 (nt 26)
A
C
G
T
16,67
0
83,33
0
16,67
0
83,33
0
5' Anticodon stern (nt 27)
A
C
G
T
27,78
0
72,22
0
0
0
0
100
0
0
0
100
0
0
100
0
100
0
0
0
Anticodon loop (nt 32)
A
C
G
T
0
100
0
0
0
0
0
100
0
0
0
100
0
0
100
0
100
0
0
0
100
0
0
0
100
0
0
0
5' Anticodon stern (nt 39)
A
C
G
T
0
0
0
100
0
77,78
0
22,22
100
0
0
0
100
0
0
0
0
5,56
0
94,44
Variable region (nt 44)
A
C
G
T
0
44,44
0
55,56
0
0
0
100
0
0
11,11
88,89
77,78
0
0
22,22
0
0
0
5,56
77,78
0
0
22,22
5' T-stern (nt 49)
A
C
G
T
0
0
100
0
5,56
0
94,44
0
11,11
0
88,89
0
0
0
100
0
0
0
100
0
T-loop (nt 54)
A
C
G
T
0
0
0
100
0
0
0
100
0
100
0
0
50
0
50
0
100
0
0
0
0
0
0
100
0
0
0
100
5' T-stern (nt 61)
A
C
G
T
0
100
0
0
0
100
0
0
0
0
0
100
0
38,89
0
61,11
0
100
0
0
3' Accepter sterm (nt 66)
A
C
G
T
0
100
0
0
0
0
0
100
0
0
0
100
0
0
0
100
0
100
0
0
0
0
0
100
0
5,56
0
94,44
Discriminator base (nt 73)
A
C
G
T
27,78
0
72,22
0

Base pairing : Watson Crick (WC), G-T and MisMatch (Mis)
WC (%)GT (%)Mis (%)
11,1188,890
10000
10000
94,445,560
10000
10000
10000
WC (%)GT (%)Mis (%)
10000
10000
10000
10000
WC (%)GT (%)Mis (%)
33,3366,670
10000
10000
77,7822,220
10000
WC (%)GT (%)Mis (%)
10000
44,4455,560
11,1188,890
10000
10000

Top