Typical 2D Structure
Serine UCN



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D-Loop V-Region T-Loop
Display 2D Consensus Structure
Display Statistical distribution of nucleotides
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Total number of organisms : 8



Statistical distribution of nucleotides (%)

5' Acceptor sterm (nt 1)
A
C
G
T
50
0
50
0
87,5
0
12,5
0
0
0
100
0
87,5
0
12,5
0
87,5
0
12,5
0
100
0
0
0
0
0
100
0
Connector 1 (nt 8)
A
C
G
T
0
0
12,5
87,5
5' D-stern (nt 10)
A
C
G
T
0
62,5
12,5
25
62,5
0
37,5
0
0
0
0
100
100
0
0
0
D-loop (nt 14)
A
C
G
T
50
0
50
0
62,5
0
0
37,5
0
0
100
0
0
0
100
0
0
0
0
100
3' D-stern (nt 22)
A
C
G
T
0
0
0
100
100
0
0
0
0
37,5
0
62,5
25
0
62,5
12,5
Connector 2 (nt 26)
A
C
G
T
12,5
0
50
37,5
37,5
0
62,5
0
5' Anticodon stern (nt 27)
A
C
G
T
12,5
0
87,5
0
0
0
0
100
0
0
0
100
0
0
100
0
0
0
100
0
Anticodon loop (nt 32)
A
C
G
T
0
100
0
0
0
0
0
100
0
0
0
100
0
0
100
0
100
0
0
0
100
0
0
0
100
0
0
0
5' Anticodon stern (nt 39)
A
C
G
T
0
100
0
0
0
75
0
25
100
0
0
0
62,5
0
25
12,5
0
50
0
50
Variable region (nt 44)
A
C
G
T
12,5
0
0
87,5
25
0
25
50
12,5
0
0
87,5
0
0
0
12,5
25
0
0
75
5' T-stern (nt 49)
A
C
G
T
0
0
100
0
12,5
0
87,5
0
37,5
0
62,5
0
0
0
100
0
0
0
100
0
T-loop (nt 54)
A
C
G
T
0
0
0
100
0
0
0
100
0
100
0
0
37,5
0
62,5
0
100
0
0
0
0
0
0
100
0
0
0
100
5' T-stern (nt 61)
A
C
G
T
0
100
0
0
0
100
0
0
0
0
0
100
0
12,5
0
87,5
0
100
0
0
3' Accepter sterm (nt 66)
A
C
G
T
0
100
0
0
0
12,5
0
87,5
0
0
0
100
0
0
0
100
0
100
0
0
0
0
0
100
0
25
0
75
Discriminator base (nt 73)
A
C
G
T
25
0
75
0

Base pairing : Watson Crick (WC), G-T and MisMatch (Mis)
WC (%)GT (%)Mis (%)
75250
87,512,50
10000
87,512,50
87,512,50
87,5012,5
10000
WC (%)GT (%)Mis (%)
62,52512,5
10000
10000
10000
WC (%)GT (%)Mis (%)
62,537,50
62,52512,5
10000
75250
10000
WC (%)GT (%)Mis (%)
10000
25750
37,562,50
10000
10000

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