Typical 2D Structure
Serine UCN



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D-Loop V-Region T-Loop
Display 2D Consensus Structure
Display Statistical distribution of nucleotides
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Total number of organisms : 16



Statistical distribution of nucleotides (%)

5' Acceptor sterm (nt 1)
A
C
G
T
18,75
0
81,25
0
100
0
0
0
81,25
0
18,75
0
100
0
0
0
100
0
0
0
100
0
0
0
0
0
100
0
Connector 1 (nt 8)
A
C
G
T
6,25
0
0
93,75
5' D-stern (nt 10)
A
C
G
T
0
62,5
0
37,5
93,75
0
6,25
0
0
0
0
100
56,25
0
43,75
0
D-loop (nt 14)
A
C
G
T
12,5
0
87,5
0
43,75
0
43,75
12,5
0
0
100
0
0
0
87,5
6,25
6,25
31,25
0
62,5
3' D-stern (nt 22)
A
C
G
T
0
25
0
75
93,75
0
6,25
0
0
6,25
0
93,75
31,25
0
68,75
0
Connector 2 (nt 26)
A
C
G
T
25
6,25
68,75
0
12,5
0
87,5
0
5' Anticodon stern (nt 27)
A
C
G
T
25
0
75
0
0
25
0
75
0
0
0
100
0
0
100
0
0
0
100
0
Anticodon loop (nt 32)
A
C
G
T
0
100
0
0
0
0
0
100
0
0
0
100
0
0
100
0
100
0
0
0
100
0
0
0
100
0
0
0
5' Anticodon stern (nt 39)
A
C
G
T
0
100
0
0
0
100
0
0
100
0
0
0
25
0
75
0
0
43,75
0
56,25
Variable region (nt 44)
A
C
G
T
0
6,25
0
93,75
0
6,25
0
93,75
0
12,5
0
87,5
81,25
0
12,5
6,25
5' T-stern (nt 49)
A
C
G
T
0
0
100
0
12,5
0
87,5
0
25
0
75
0
0
0
100
0
0
0
100
0
T-loop (nt 54)
A
C
G
T
0
0
0
100
0
0
0
100
0
100
0
0
12,5
0
87,5
0
100
0
0
0
6,25
18,75
0
75
0
0
0
100
5' T-stern (nt 61)
A
C
G
T
0
100
0
0
0
93,75
0
6,25
0
18,75
0
81,25
0
6,25
0
93,75
0
100
0
0
3' Accepter sterm (nt 66)
A
C
G
T
0
100
0
0
0
0
0
100
0
0
0
100
0
0
0
100
0
18,75
0
81,25
0
0
0
100
0
25
0
75
Discriminator base (nt 73)
A
C
G
T
12,5
0
87,5
0

Base pairing : Watson Crick (WC), G-T and MisMatch (Mis)
WC (%)GT (%)Mis (%)
43,7556,250
10000
10000
10000
10000
10000
10000
WC (%)GT (%)Mis (%)
93,756,250
10000
93,756,250
81,2518,750
WC (%)GT (%)Mis (%)
68,7531,250
50500
10000
10000
10000
WC (%)GT (%)Mis (%)
10000
18,7581,250
43,7556,250
93,756,250
10000

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