Typical 2D Structure
Serine UCN



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D-Loop V-Region T-Loop
Display 2D Consensus Structure
Display Statistical distribution of nucleotides
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Total number of organisms : 33



Statistical distribution of nucleotides (%)

5' Acceptor sterm (nt 1)
A
C
G
T
36,36
0
63,64
0
96,97
0
3,03
0
39,39
0
60,61
0
100
0
0
0
93,94
0
6,06
0
93,94
0
6,06
0
0
0
100
0
Connector 1 (nt 8)
A
C
G
T
27,27
0
0
72,73
0
0
0
3,03
5' D-stern (nt 10)
A
C
G
T
0
78,79
0
21,21
93,94
0
6,06
0
0
0
0
100
78,79
0
21,21
0
D-loop (nt 14)
A
C
G
T
27,27
0
63,64
9,09
54,55
0
27,27
18,18
0
0
100
0
0
0
93,94
3,03
12,12
24,24
0
63,64
3' D-stern (nt 22)
A
C
G
T
0
12,12
0
87,88
96,97
0
3,03
0
0
6,06
0
93,94
18,18
0
81,82
0
Connector 2 (nt 26)
A
C
G
T
27,27
6,06
60,61
6,06
12,12
0
78,79
9,09
5' Anticodon stern (nt 27)
A
C
G
T
24,24
0
75,76
0
0
33,33
0
66,67
0
0
0
100
0
0
100
0
0
0
100
0
Anticodon loop (nt 32)
A
C
G
T
0
100
0
0
0
0
0
100
0
0
0
100
0
0
100
0
100
0
0
0
100
0
0
0
100
0
0
0
5' Anticodon stern (nt 39)
A
C
G
T
0
100
0
0
0
90,91
0
9,09
96,97
0
3,03
0
33,33
0
63,64
3,03
0
30,3
0
69,7
Variable region (nt 44)
A
C
G
T
0
9,09
3,03
87,88
9,09
3,03
3,03
84,85
6,06
9,09
0
84,85
75,76
0
9,09
15,15
5' T-stern (nt 49)
A
C
G
T
0
0
100
0
12,12
0
87,88
0
21,21
0
78,79
0
3,03
0
96,97
0
0
0
100
0
T-loop (nt 54)
A
C
G
T
0
0
0
100
0
3,03
0
96,97
0
96,97
3,03
0
18,18
0
81,82
0
96,97
0
0
3,03
6,06
12,12
3,03
75,76
0
0
0
100
5' T-stern (nt 61)
A
C
G
T
0
100
0
0
0
93,94
0
6,06
0
9,09
0
90,91
0
3,03
0
96,97
0
100
0
0
3' Accepter sterm (nt 66)
A
C
G
T
0
100
0
0
0
0
0
100
0
3,03
0
96,97
0
0
0
100
0
60,61
0
39,39
0
0
0
100
0
15,15
0
84,85
Discriminator base (nt 73)
A
C
G
T
27,27
0
72,73
0

Base pairing : Watson Crick (WC), G-T and MisMatch (Mis)
WC (%)GT (%)Mis (%)
51,5248,480
96,973,030
10000
10000
96,973,030
93,946,060
10000
WC (%)GT (%)Mis (%)
96,973,030
10000
96,973,030
90,919,090
WC (%)GT (%)Mis (%)
54,5545,450
66,6730,33,03
96,973,030
90,919,090
10000
WC (%)GT (%)Mis (%)
10000
15,1584,850
30,369,70
96,973,030
10000

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