Typical 2D Structure
Serine UCN



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D-Loop V-Region T-Loop
Display 2D Consensus Structure
Display Statistical distribution of nucleotides
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Total number of organisms : 36



Statistical distribution of nucleotides (%)

5' Acceptor sterm (nt 1)
A
C
G
T
61,11
0
38,89
0
100
0
0
0
0
0
100
0
100
0
0
0
75
0
25
0
100
0
0
0
0
0
100
0
Connector 1 (nt 8)
A
C
G
T
88,89
0
0
11,11
5' D-stern (nt 10)
A
C
G
T
0
100
0
0
100
0
0
0
0
0
0
100
97,22
0
2,78
0
D-loop (nt 14)
A
C
G
T
13,89
0
80,56
5,56
16,67
0
0
83,33
2,78
0
97,22
0
2,78
0
97,22
0
0
13,89
0
86,11
3' D-stern (nt 22)
A
C
G
T
0
0
0
100
100
0
0
0
0
0
0
100
0
0
100
0
Connector 2 (nt 26)
A
C
G
T
66,67
2,78
27,78
2,78
0
2,78
8,33
88,89
5' Anticodon stern (nt 27)
A
C
G
T
11,11
0
88,89
0
0
0
0
100
0
0
0
100
0
0
100
0
2,78
0
97,22
0
Anticodon loop (nt 32)
A
C
G
T
0
100
0
0
0
0
0
100
0
0
0
100
0
0
100
0
100
0
0
0
100
0
0
0
100
0
0
0
5' Anticodon stern (nt 39)
A
C
G
T
0
97,22
0
2,78
0
100
0
0
91,67
0
8,33
0
83,33
0
16,67
0
0
16,67
0
83,33
Variable region (nt 44)
A
C
G
T
22,22
0
33,33
44,44
41,67
0
50
8,33
5,56
2,78
55,56
36,11
88,89
0
8,33
2,78
5' T-stern (nt 49)
A
C
G
T
0
0
100
0
58,33
0
41,67
0
16,67
0
83,33
0
0
0
100
0
0
0
100
0
T-loop (nt 54)
A
C
G
T
0
0
0
100
0
0
0
100
0
100
0
0
0
0
100
0
100
0
0
0
2,78
2,78
2,78
91,67
0
0
0
100
5' T-stern (nt 61)
A
C
G
T
0
100
0
0
0
100
0
0
0
0
0
100
0
0
0
100
0
100
0
0
3' Accepter sterm (nt 66)
A
C
G
T
0
100
0
0
0
0
0
100
0
2,78
0
97,22
0
0
0
100
0
100
0
0
0
0
0
100
0
0
0
100
Discriminator base (nt 73)
A
C
G
T
33,33
0
66,67
0

Base pairing : Watson Crick (WC), G-T and MisMatch (Mis)
WC (%)GT (%)Mis (%)
61,1138,890
10000
10000
10000
77,7822,220
10000
10000
WC (%)GT (%)Mis (%)
10000
10000
10000
97,222,780
WC (%)GT (%)Mis (%)
27,7872,220
83,3316,670
91,678,330
10000
10000
WC (%)GT (%)Mis (%)
10000
58,3341,670
16,6783,330
10000
10000

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