Typical 2D Structure
Serine UCN



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D-Loop V-Region T-Loop
Display 2D Consensus Structure
Display Statistical distribution of nucleotides
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Total number of organisms : 70



Statistical distribution of nucleotides (%)

5' Acceptor sterm (nt 1)
A
C
G
T
32,86
0
67,14
0
100
0
0
0
0
0
100
0
100
0
0
0
78,57
0
21,43
0
100
0
0
0
0
0
100
0
Connector 1 (nt 8)
A
C
G
T
84,29
0
1,43
14,29
5' D-stern (nt 10)
A
C
G
T
0
97,14
0
2,86
100
0
0
0
0
0
0
100
98,57
0
1,43
0
D-loop (nt 14)
A
C
G
T
30
0
67,14
2,86
17,14
0
4,29
78,57
1,43
0
98,57
0
1,43
0
98,57
0
2,86
10
0
87,14
3' D-stern (nt 22)
A
C
G
T
0
0
0
100
100
0
0
0
0
0
0
100
2,86
0
97,14
0
Connector 2 (nt 26)
A
C
G
T
62,86
1,43
34,29
1,43
1,43
8,57
17,14
72,86
5' Anticodon stern (nt 27)
A
C
G
T
35,71
0
64,29
0
0
1,43
0
98,57
0
0
0
100
0
0
100
0
1,43
0
98,57
0
Anticodon loop (nt 32)
A
C
G
T
0
100
0
0
0
0
0
100
0
0
0
100
0
0
100
0
100
0
0
0
100
0
0
0
100
0
0
0
5' Anticodon stern (nt 39)
A
C
G
T
0
98,57
0
1,43
0
100
0
0
95,71
0
4,29
0
67,14
0
31,43
1,43
0
10
0
90
Variable region (nt 44)
A
C
G
T
14,29
7,14
17,14
61,43
31,43
5,71
25,71
37,14
5,71
12,86
38,57
42,86
0
0
0
1,43
82,86
0
4,29
12,86
5' T-stern (nt 49)
A
C
G
T
0
0
100
0
44,29
0
55,71
0
8,57
0
91,43
0
0
0
100
0
0
0
100
0
T-loop (nt 54)
A
C
G
T
0
0
0
100
0
0
0
100
0
100
0
0
4,29
0
95,71
0
100
0
0
0
12,86
11,43
1,43
74,29
2,86
0
0
97,14
5' T-stern (nt 61)
A
C
G
T
0
100
0
0
0
100
0
0
0
1,43
0
98,57
0
1,43
0
98,57
0
100
0
0
3' Accepter sterm (nt 66)
A
C
G
T
0
100
0
0
0
0
0
100
0
4,29
0
95,71
0
0
0
100
0
100
0
0
0
0
0
100
0
1,43
0
98,57
Discriminator base (nt 73)
A
C
G
T
61,43
0
38,57
0

Base pairing : Watson Crick (WC), G-T and MisMatch (Mis)
WC (%)GT (%)Mis (%)
34,2965,710
10000
10000
10000
82,8617,140
10000
10000
WC (%)GT (%)Mis (%)
10000
10000
10000
98,571,430
WC (%)GT (%)Mis (%)
42,8655,711,43
65,7131,432,86
95,714,290
10000
10000
WC (%)GT (%)Mis (%)
10000
45,7154,290
10900
10000
10000

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