Typical 2D Structure
Threonine



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D-Loop V-Region T-Loop
Display 2D Consensus Structure
Display Statistical distribution of nucleotides
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Total number of organisms : 33



Statistical distribution of nucleotides (%)

5' Acceptor sterm (nt 1)
A
C
G
T
0
0
100
0
0
54,55
0
45,45
0
96,97
0
3,03
0
84,85
0
15,15
3,03
27,27
0
69,7
15,15
21,21
24,24
39,39
18,18
0
81,82
0
Connector 1 (nt 8)
A
C
G
T
0
0
0
100
100
0
0
0
5' D-stern (nt 10)
A
C
G
T
3,03
0
96,97
0
0
0
0
100
100
0
0
0
0
15,15
0
84,85
D-loop (nt 14)
A
C
G
T
100
0
0
0
87,88
3,03
6,06
3,03
63,64
21,21
12,12
3,03
15,15
48,48
3,03
33,33
60,61
12,12
0
27,27
0
3,03
0
3,03
100
0
0
0
3' D-stern (nt 22)
A
C
G
T
30,3
0
12,12
57,58
0
0
0
100
100
0
0
0
0
90,91
0
9,09
Connector 2 (nt 26)
A
C
G
T
42,42
27,27
6,06
24,24
5' Anticodon stern (nt 27)
A
C
G
T
0
87,88
0
12,12
3,03
33,33
0
63,64
18,18
0
81,82
0
0
0
100
0
0
15,15
0
84,85
Anticodon loop (nt 32)
A
C
G
T
0
100
0
0
0
0
0
100
0
0
0
100
0
0
100
0
0
0
0
100
100
0
0
0
100
0
0
0
5' Anticodon stern (nt 39)
A
C
G
T
84,85
6,06
9,09
0
0
100
0
0
0
90,91
0
9,09
54,55
0
33,33
12,12
30,3
0
69,7
0
Variable region (nt 44)
A
C
G
T
90,91
3,03
3,03
3,03
84,85
3,03
12,12
0
96,97
3,03
0
0
6,06
18,18
0
75,76
5' T-stern (nt 49)
A
C
G
T
0
0
100
0
57,58
0
42,42
0
93,94
0
6,06
0
33,33
6,06
60,61
0
60,61
12,12
12,12
15,15
T-loop (nt 54)
A
C
G
T
21,21
39,39
18,18
21,21
21,21
39,39
0
33,33
21,21
30,3
6,06
30,3
24,24
21,21
6,06
12,12
24,24
30,3
3,03
0
9,09
9,09
0
6,06
3,03
0
0
0
18,18
45,45
3,03
33,33
5' T-stern (nt 61)
A
C
G
T
12,12
33,33
3,03
51,52
6,06
75,76
0
18,18
9,09
6,06
0
84,85
0
45,45
0
54,55
0
100
0
0
3' Accepter sterm (nt 66)
A
C
G
T
0
78,79
0
21,21
27,27
30,3
0
42,42
78,79
3,03
12,12
6,06
18,18
0
81,82
0
6,06
0
93,94
0
69,7
0
30,3
0
0
93,94
0
6,06
Discriminator base (nt 73)
A
C
G
T
96,97
3,03
0
0

Base pairing : Watson Crick (WC), G-T and MisMatch (Mis)
WC (%)GT (%)Mis (%)
93,946,060
75,76024,24
96,9703,03
96,9703,03
84,85015,15
63,643,0333,33
96,973,030
WC (%)GT (%)Mis (%)
93,946,060
10000
10000
33,333,0363,64
WC (%)GT (%)Mis (%)
75,763,0321,21
90,9109,09
90,9109,09
10000
75,769,0915,15
WC (%)GT (%)Mis (%)
10000
96,9703,03
87,88012,12
75,76024,24
63,64036,36

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