Typical 2D Structure
Threonine



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D-Loop V-Region T-Loop
Display 2D Consensus Structure
Display Statistical distribution of nucleotides
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Total number of organisms : 9



Statistical distribution of nucleotides (%)

5' Acceptor sterm (nt 1)
A
C
G
T
0
0
100
0
0
33,33
0
66,67
0
100
0
0
0
0
0
100
0
11,11
0
88,89
11,11
22,22
0
66,67
0
0
100
0
Connector 1 (nt 8)
A
C
G
T
0
0
0
100
100
0
0
0
5' D-stern (nt 10)
A
C
G
T
0
0
100
0
0
0
0
100
100
0
0
0
0
22,22
0
77,78
D-loop (nt 14)
A
C
G
T
100
0
0
0
88,89
0
0
11,11
0
55,56
11,11
33,33
11,11
0
11,11
77,78
77,78
0
0
22,22
33,33
0
0
11,11
0
11,11
0
0
100
0
0
0
3' D-stern (nt 22)
A
C
G
T
55,56
0
0
44,44
0
0
0
100
100
0
0
0
0
77,78
0
22,22
Connector 2 (nt 26)
A
C
G
T
55,56
22,22
0
22,22
5' Anticodon stern (nt 27)
A
C
G
T
0
88,89
0
11,11
0
11,11
0
88,89
11,11
0
88,89
0
0
0
100
0
0
0
0
100
Anticodon loop (nt 32)
A
C
G
T
0
88,89
0
11,11
0
0
0
100
0
0
0
100
0
0
100
0
0
0
0
100
100
0
0
0
100
0
0
0
5' Anticodon stern (nt 39)
A
C
G
T
100
0
0
0
0
100
0
0
0
100
0
0
88,89
0
11,11
0
22,22
0
77,78
0
Variable region (nt 44)
A
C
G
T
77,78
22,22
0
0
77,78
0
22,22
0
100
0
0
0
11,11
0
0
88,89
5' T-stern (nt 49)
A
C
G
T
0
0
100
0
22,22
0
77,78
0
44,44
0
55,56
0
22,22
0
77,78
0
88,89
0
0
11,11
T-loop (nt 54)
A
C
G
T
33,33
44,44
0
22,22
22,22
11,11
11,11
55,56
22,22
33,33
0
44,44
66,67
0
0
33,33
55,56
22,22
0
22,22
11,11
0
0
0
77,78
0
0
22,22
5' T-stern (nt 61)
A
C
G
T
22,22
22,22
11,11
44,44
11,11
77,78
0
11,11
0
55,56
0
44,44
0
77,78
0
22,22
0
100
0
0
3' Accepter sterm (nt 66)
A
C
G
T
0
88,89
0
11,11
11,11
33,33
0
55,56
77,78
0
11,11
11,11
100
0
0
0
0
0
100
0
100
0
0
0
0
100
0
0
Discriminator base (nt 73)
A
C
G
T
77,78
0
11,11
11,11

Base pairing : Watson Crick (WC), G-T and MisMatch (Mis)
WC (%)GT (%)Mis (%)
10000
66,67033,33
10000
10000
88,89011,11
22,22077,78
88,8911,110
WC (%)GT (%)Mis (%)
77,7822,220
10000
10000
33,33066,67
WC (%)GT (%)Mis (%)
88,89011,11
10000
88,89011,11
10000
10000
WC (%)GT (%)Mis (%)
10000
10000
10000
88,89011,11
44,4411,1144,44

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