Typical 2D Structure
Threonine



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D-Loop V-Region T-Loop
Display 2D Consensus Structure
Display Statistical distribution of nucleotides
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Total number of organisms : 11



Statistical distribution of nucleotides (%)

5' Acceptor sterm (nt 1)
A
C
G
T
0
0
100
0
0
0
0
100
0
100
0
0
0
0
0
100
0
0
0
100
9,09
9,09
0
81,82
0
0
100
0
Connector 1 (nt 8)
A
C
G
T
0
0
0
100
100
0
0
0
5' D-stern (nt 10)
A
C
G
T
0
0
100
0
0
0
0
100
100
0
0
0
0
0
0
100
D-loop (nt 14)
A
C
G
T
100
0
0
0
36,36
18,18
18,18
27,27
18,18
27,27
0
54,55
90,91
9,09
0
0
0
0
0
18,18
100
0
0
0
3' D-stern (nt 22)
A
C
G
T
18,18
0
0
81,82
0
0
0
100
100
0
0
0
0
100
0
0
Connector 2 (nt 26)
A
C
G
T
0
72,73
0
27,27
5' Anticodon stern (nt 27)
A
C
G
T
0
9,09
0
90,91
0
0
0
100
0
0
100
0
0
0
100
0
0
0
0
100
Anticodon loop (nt 32)
A
C
G
T
0
100
0
0
0
0
0
100
0
0
0
100
0
0
100
0
0
0
0
100
100
0
0
0
100
0
0
0
5' Anticodon stern (nt 39)
A
C
G
T
63,64
0
36,36
0
0
100
0
0
0
100
0
0
100
0
0
0
100
0
0
0
Variable region (nt 44)
A
C
G
T
100
0
0
0
90,91
0
9,09
0
100
0
0
0
18,18
36,36
0
45,45
5' T-stern (nt 49)
A
C
G
T
0
0
100
0
0
0
100
0
100
0
0
0
0
0
100
0
90,91
0
9,09
0
T-loop (nt 54)
A
C
G
T
90,91
0
9,09
0
0
63,64
0
36,36
90,91
0
0
9,09
9,09
63,64
0
27,27
36,36
54,55
0
9,09
45,45
27,27
0
27,27
36,36
36,36
18,18
9,09
9,09
54,55
18,18
0
27,27
0
0
0
0
100
0
0
5' T-stern (nt 61)
A
C
G
T
0
81,82
0
18,18
0
100
0
0
0
0
0
100
0
100
0
0
0
100
0
0
3' Accepter sterm (nt 66)
A
C
G
T
0
100
0
0
0
9,09
0
90,91
100
0
0
0
100
0
0
0
0
0
100
0
100
0
0
0
0
100
0
0
Discriminator base (nt 73)
A
C
G
T
0
0
0
100

Base pairing : Watson Crick (WC), G-T and MisMatch (Mis)
WC (%)GT (%)Mis (%)
10000
10000
10000
10000
10000
9,09090,91
10000
WC (%)GT (%)Mis (%)
10000
10000
10000
18,18081,82
WC (%)GT (%)Mis (%)
90,9109,09
10000
10000
10000
63,6436,360
WC (%)GT (%)Mis (%)
10000
10000
10000
10000
9,099,0981,82

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