Typical 2D Structure
Threonine



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D-Loop V-Region T-Loop
Display 2D Consensus Structure
Display Statistical distribution of nucleotides
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Total number of organisms : 70



Statistical distribution of nucleotides (%)

5' Acceptor sterm (nt 1)
A
C
G
T
0
0
100
0
0
4,29
0
95,71
0
100
0
0
0
7,14
0
92,86
12,86
8,57
0
78,57
4,29
15,71
0
80
0
0
100
0
Connector 1 (nt 8)
A
C
G
T
0
0
0
100
100
0
0
0
5' D-stern (nt 10)
A
C
G
T
1,43
0
98,57
0
0
0
0
100
98,57
0
0
1,43
0
11,43
0
88,57
D-loop (nt 14)
A
C
G
T
100
0
0
0
51,43
10
2,86
35,71
10
41,43
5,71
42,86
47,14
14,29
4,29
34,29
84,29
8,57
1,43
5,71
42,86
0
0
1,43
0
4,29
0
0
100
0
0
0
3' D-stern (nt 22)
A
C
G
T
57,14
0
0
42,86
1,43
0
0
98,57
100
0
0
0
0
90
0
10
Connector 2 (nt 26)
A
C
G
T
30
60
1,43
8,57
5' Anticodon stern (nt 27)
A
C
G
T
0
78,57
0
21,43
0
34,29
0
65,71
2,86
0
97,14
0
1,43
0
98,57
0
0
11,43
0
88,57
Anticodon loop (nt 32)
A
C
G
T
0
85,71
0
14,29
0
0
0
100
0
0
0
100
0
0
100
0
0
0
0
100
100
0
0
0
100
0
0
0
5' Anticodon stern (nt 39)
A
C
G
T
90
0
10
0
0
98,57
0
1,43
0
98,57
0
1,43
65,71
0
34,29
0
32,86
0
67,14
0
Variable region (nt 44)
A
C
G
T
94,29
5,71
0
0
84,29
0
15,71
0
100
0
0
0
70
10
0
20
5' T-stern (nt 49)
A
C
G
T
0
0
100
0
5,71
0
94,29
0
78,57
0
21,43
0
11,43
0
88,57
0
82,86
1,43
14,29
1,43
T-loop (nt 54)
A
C
G
T
58,57
22,86
11,43
7,14
31,43
37,14
7,14
24,29
74,29
11,43
2,86
11,43
54,29
24,29
5,71
15,71
30
52,86
1,43
15,71
35,71
42,86
2,86
12,86
44,29
27,14
2,86
8,57
22,86
24,29
4,29
7,14
4,29
2,86
0
0
52,86
32,86
1,43
12,86
5' T-stern (nt 61)
A
C
G
T
2,86
62,86
1,43
32,86
1,43
91,43
0
7,14
0
18,57
0
81,43
0
94,29
0
5,71
0
100
0
0
3' Accepter sterm (nt 66)
A
C
G
T
0
98,57
0
1,43
15,71
14,29
0
70
82,86
2,86
10
4,29
94,29
0
5,71
0
0
0
100
0
98,57
1,43
0
0
0
98,57
0
1,43
Discriminator base (nt 73)
A
C
G
T
11,43
1,43
1,43
85,71

Base pairing : Watson Crick (WC), G-T and MisMatch (Mis)
WC (%)GT (%)Mis (%)
98,571,430
94,2905,71
10000
98,5701,43
82,862,8614,29
18,57081,43
98,571,430
WC (%)GT (%)Mis (%)
91,438,570
10000
10000
45,71054,29
WC (%)GT (%)Mis (%)
88,57011,43
10000
98,5701,43
10000
78,571011,43
WC (%)GT (%)Mis (%)
10000
10000
97,142,860
95,7104,29
41,434,2954,29

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