Typical 2D Structure
Alanine



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D-Loop V-Region T-Loop
Display 2D Consensus Structure
Display Statistical distribution of nucleotides
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Total number of organisms : 20



Statistical distribution of nucleotides (%)

5' Acceptor sterm (nt 1)
A
C
G
T
70
0
30
0
100
0
0
0
0
0
100
0
90
0
10
0
80
0
20
0
0
20
0
80
0
0
0
100
Connector 1 (nt 8)
A
C
G
T
0
0
0
100
100
0
0
0
5' D-stern (nt 10)
A
C
G
T
0
0
100
0
0
100
0
0
0
0
0
100
0
0
0
100
D-loop (nt 14)
A
C
G
T
100
0
0
0
100
0
0
0
0
0
5
95
5
0
15
80
0
0
0
5
100
0
0
0
3' D-stern (nt 22)
A
C
G
T
100
0
0
0
100
0
0
0
0
0
100
0
0
20
0
80
Connector 2 (nt 26)
A
C
G
T
55
0
45
0
5' Anticodon stern (nt 27)
A
C
G
T
0
15
0
85
0
0
0
100
0
95
0
5
0
0
100
0
100
0
0
0
Anticodon loop (nt 32)
A
C
G
T
0
0
0
100
0
0
0
100
0
0
0
100
0
0
100
0
0
100
0
0
0
0
100
0
0
0
0
100
5' Anticodon stern (nt 39)
A
C
G
T
0
0
0
100
0
95
0
5
0
0
100
0
60
0
40
0
70
0
25
5
Variable region (nt 44)
A
C
G
T
0
0
10
90
0
5
90
5
100
0
0
0
0
0
0
100
5' T-stern (nt 49)
A
C
G
T
0
0
100
0
0
100
0
0
95
0
5
0
70
0
30
0
0
0
100
0
T-loop (nt 54)
A
C
G
T
90
0
10
0
0
0
0
100
100
0
0
0
60
0
40
0
100
0
0
0
15
0
85
0
0
0
40
60
0
5
0
0
0
5
35
60
5' T-stern (nt 61)
A
C
G
T
0
95
0
5
0
5
0
95
0
0
0
100
0
0
100
0
0
10
0
90
3' Accepter sterm (nt 66)
A
C
G
T
100
0
0
0
60
0
40
0
0
0
0
100
0
0
0
100
0
100
0
0
0
0
0
100
0
0
0
100
Discriminator base (nt 73)
A
C
G
T
100
0
0
0

Base pairing : Watson Crick (WC), G-T and MisMatch (Mis)
WC (%)GT (%)Mis (%)
70300
10000
10000
90100
80200
80200
10000
WC (%)GT (%)Mis (%)
20800
10000
10000
10000
WC (%)GT (%)Mis (%)
85105
60400
9550
9550
10000
WC (%)GT (%)Mis (%)
10900
10000
9550
75250
9550

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