Typical 2D Structure
Alanine



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D-Loop V-Region T-Loop
Display 2D Consensus Structure
Display Statistical distribution of nucleotides
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Total number of organisms : 17



Statistical distribution of nucleotides (%)

5' Acceptor sterm (nt 1)
A
C
G
T
64,71
0
35,29
0
94,12
0
5,88
0
0
0
100
0
0
0
100
0
17,65
0
82,35
0
0
94,12
0
5,88
0
0
0
100
Connector 1 (nt 8)
A
C
G
T
0
0
0
100
100
0
0
0
5' D-stern (nt 10)
A
C
G
T
0
0
100
0
0
94,12
0
5,88
0
0
0
100
0
0
0
100
D-loop (nt 14)
A
C
G
T
100
0
0
0
100
0
0
0
0
0
5,88
94,12
0
0
5,88
94,12
0
0
0
5,88
100
0
0
0
3' D-stern (nt 22)
A
C
G
T
100
0
0
0
100
0
0
0
0
0
100
0
0
5,88
0
94,12
Connector 2 (nt 26)
A
C
G
T
29,41
0
70,59
0
5' Anticodon stern (nt 27)
A
C
G
T
35,29
0
64,71
0
0
52,94
0
47,06
0
0
0
100
5,88
0
94,12
0
88,24
0
11,76
0
Anticodon loop (nt 32)
A
C
G
T
0
0
0
100
0
0
0
100
0
0
0
100
0
0
100
0
0
100
0
0
5,88
0
94,12
0
0
5,88
5,88
88,24
5' Anticodon stern (nt 39)
A
C
G
T
0
0
0
100
0
94,12
0
5,88
94,12
0
5,88
0
23,53
0
76,47
0
0
0
0
100
Variable region (nt 44)
A
C
G
T
0
0
0
100
0
0
100
0
100
0
0
0
0
0
0
100
5' T-stern (nt 49)
A
C
G
T
0
0
100
0
0
82,35
0
17,65
94,12
0
5,88
0
23,53
0
76,47
0
82,35
0
17,65
0
T-loop (nt 54)
A
C
G
T
17,65
0
82,35
0
0
11,76
5,88
82,35
52,94
0
47,06
0
17,65
0
70,59
11,76
17,65
0
82,35
0
11,76
0
41,18
29,41
0
17,65
23,53
58,82
5' T-stern (nt 61)
A
C
G
T
0
11,76
0
88,24
0
11,76
0
88,24
0
0
0
100
0
0
100
0
0
94,12
0
5,88
3' Accepter sterm (nt 66)
A
C
G
T
100
0
0
0
0
0
100
0
0
0
0
100
0
100
0
0
0
100
0
0
0
0
0
100
0
0
0
100
Discriminator base (nt 73)
A
C
G
T
94,12
0
5,88
0

Base pairing : Watson Crick (WC), G-T and MisMatch (Mis)
WC (%)GT (%)Mis (%)
64,7135,290
94,125,880
10000
10000
17,6582,350
94,125,880
10000
WC (%)GT (%)Mis (%)
5,8894,120
94,125,880
10000
10000
WC (%)GT (%)Mis (%)
35,2964,710
76,4723,530
94,125,880
10000
88,2411,760
WC (%)GT (%)Mis (%)
94,125,880
82,3517,650
94,125,880
35,2964,710
94,125,880

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