Typical 2D Structure
Alanine



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D-Loop V-Region T-Loop
Display 2D Consensus Structure
Display Statistical distribution of nucleotides
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Total number of organisms : 43



Statistical distribution of nucleotides (%)

5' Acceptor sterm (nt 1)
A
C
G
T
9,3
0
90,7
0
97,67
0
2,33
0
0
0
100
0
2,33
0
97,67
0
93,02
0
6,98
0
0
18,6
0
81,4
0
0
0
100
Connector 1 (nt 8)
A
C
G
T
0
0
0
100
97,67
0
2,33
0
5' D-stern (nt 10)
A
C
G
T
2,33
0
97,67
0
0
97,67
0
2,33
0
0
0
100
0
0
0
100
D-loop (nt 14)
A
C
G
T
100
0
0
0
100
0
0
0
0
0
2,33
97,67
2,33
0
2,33
95,35
0
0
0
2,33
100
0
0
0
3' D-stern (nt 22)
A
C
G
T
100
0
0
0
100
0
0
0
0
0
100
0
0
18,6
0
81,4
Connector 2 (nt 26)
A
C
G
T
9,3
0
90,7
0
5' Anticodon stern (nt 27)
A
C
G
T
2,33
0
37,21
60,47
0
2,33
0
97,67
0
2,33
0
97,67
0
0
100
0
95,35
0
4,65
0
Anticodon loop (nt 32)
A
C
G
T
0
4,65
2,33
93,02
0
0
0
100
0
0
0
100
0
0
100
0
0
100
0
0
90,7
0
9,3
0
0
0
0
100
5' Anticodon stern (nt 39)
A
C
G
T
0
2,33
0
97,67
0
100
0
0
97,67
0
2,33
0
88,37
0
11,63
0
6,98
0
0
93,02
Variable region (nt 44)
A
C
G
T
0
0
0
100
0
0
100
0
100
0
0
0
0
0
0
100
5' T-stern (nt 49)
A
C
G
T
0
0
100
0
0
2,33
0
97,67
83,72
0
16,28
0
90,7
0
9,3
0
0
0
100
0
T-loop (nt 54)
A
C
G
T
86,05
0
13,95
0
2,33
0
0
97,67
69,77
0
27,91
2,33
6,98
2,33
9,3
81,4
55,81
0
44,19
0
11,63
0
81,4
2,33
0
0
0
100
5' T-stern (nt 61)
A
C
G
T
0
100
0
0
0
2,33
0
97,67
0
2,33
0
97,67
0
0
100
0
0
97,67
0
2,33
3' Accepter sterm (nt 66)
A
C
G
T
100
0
0
0
39,53
0
60,47
0
0
0
0
100
0
97,67
0
2,33
0
97,67
0
2,33
0
2,33
0
97,67
0
0
0
100
Discriminator base (nt 73)
A
C
G
T
97,67
0
2,33
0

Base pairing : Watson Crick (WC), G-T and MisMatch (Mis)
WC (%)GT (%)Mis (%)
9,390,70
10000
97,672,330
10000
93,026,980
58,1441,860
10000
WC (%)GT (%)Mis (%)
20,9379,070
97,672,330
10000
10000
WC (%)GT (%)Mis (%)
9,337,2153,49
90,79,30
10000
10000
97,672,330
WC (%)GT (%)Mis (%)
97,672,330
2,3397,670
86,0513,950
93,026,980
10000

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