Typical 2D Structure
Alanine



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D-Loop V-Region T-Loop
Display 2D Consensus Structure
Display Statistical distribution of nucleotides
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Total number of organisms : 11



Statistical distribution of nucleotides (%)

5' Acceptor sterm (nt 1)
A
C
G
T
63,64
0
36,36
0
100
0
0
0
0
0
100
0
0
0
100
0
18,18
0
81,82
0
0
100
0
0
0
0
0
100
Connector 1 (nt 8)
A
C
G
T
0
0
0
100
100
0
0
0
5' D-stern (nt 10)
A
C
G
T
0
0
100
0
0
100
0
0
0
0
0
100
0
0
0
100
D-loop (nt 14)
A
C
G
T
100
0
0
0
100
0
0
0
0
0
0
100
0
0
0
100
100
0
0
0
3' D-stern (nt 22)
A
C
G
T
100
0
0
0
100
0
0
0
0
0
100
0
0
27,27
0
72,73
Connector 2 (nt 26)
A
C
G
T
45,45
0
54,55
0
5' Anticodon stern (nt 27)
A
C
G
T
0
0
72,73
27,27
0
0
0
100
0
0
0
100
0
0
100
0
72,73
0
0
27,27
Anticodon loop (nt 32)
A
C
G
T
0
0
0
100
0
0
0
100
0
0
0
100
0
9,09
90,91
0
0
90,91
9,09
0
72,73
0
27,27
0
9,09
0
9,09
81,82
5' Anticodon stern (nt 39)
A
C
G
T
0
0
0
100
0
100
0
0
100
0
0
0
54,55
0
45,45
0
0
27,27
0
72,73
Variable region (nt 44)
A
C
G
T
0
0
0
100
0
0
100
0
100
0
0
0
0
0
0
100
5' T-stern (nt 49)
A
C
G
T
0
0
100
0
0
0
0
100
36,36
0
63,64
0
81,82
0
18,18
0
0
0
100
0
T-loop (nt 54)
A
C
G
T
72,73
0
27,27
0
0
0
0
100
90,91
0
9,09
0
9,09
0
45,45
45,45
54,55
0
45,45
0
9,09
18,18
18,18
54,55
0
0
0
100
5' T-stern (nt 61)
A
C
G
T
0
100
0
0
0
0
0
100
0
27,27
0
72,73
0
0
100
0
0
100
0
0
3' Accepter sterm (nt 66)
A
C
G
T
100
0
0
0
0
0
100
0
0
9,09
0
90,91
0
100
0
0
0
100
0
0
0
0
0
100
0
0
0
100
Discriminator base (nt 73)
A
C
G
T
100
0
0
0

Base pairing : Watson Crick (WC), G-T and MisMatch (Mis)
WC (%)GT (%)Mis (%)
63,6436,360
10000
10000
10000
27,2772,730
10000
10000
WC (%)GT (%)Mis (%)
27,2772,730
10000
10000
10000
WC (%)GT (%)Mis (%)
27,2745,4527,27
54,5545,450
10000
10000
72,73027,27
WC (%)GT (%)Mis (%)
10000
01000
63,6436,360
81,8218,180
10000

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