Typical 2D Structure
Alanine



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D-Loop V-Region T-Loop
Display 2D Consensus Structure
Display Statistical distribution of nucleotides
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Total number of organisms : 78



Statistical distribution of nucleotides (%)

5' Acceptor sterm (nt 1)
A
C
G
T
37,18
0
62,82
0
97,44
0
2,56
0
2,56
0
97,44
0
1,28
0
98,72
0
66,67
0
33,33
0
0
41,03
0
58,97
0
1,28
0
98,72
Connector 1 (nt 8)
A
C
G
T
0
0
0
100
98,72
0
1,28
0
5' D-stern (nt 10)
A
C
G
T
1,28
0
98,72
0
0
97,44
0
2,56
0
0
0
100
0
0
0
100
D-loop (nt 14)
A
C
G
T
100
0
0
0
100
0
0
0
1,28
0
1,28
97,44
8,97
0
3,85
87,18
0
0
0
1,28
100
0
0
0
3' D-stern (nt 22)
A
C
G
T
100
0
0
0
100
0
0
0
1,28
0
98,72
0
1,28
14,1
0
84,62
Connector 2 (nt 26)
A
C
G
T
20,51
0
79,49
0
5' Anticodon stern (nt 27)
A
C
G
T
8,97
2,56
44,87
43,59
0
1,28
0
98,72
0
1,28
0
98,72
0
0
100
0
92,31
0
2,56
5,13
Anticodon loop (nt 32)
A
C
G
T
0
2,56
1,28
96,15
0
0
0
100
0
0
0
100
0
1,28
98,72
0
0
98,72
1,28
0
85,9
0
14,1
0
1,28
0
1,28
97,44
5' Anticodon stern (nt 39)
A
C
G
T
1,28
1,28
0
97,44
0
100
0
0
97,44
0
2,56
0
75,64
0
21,79
2,56
3,85
6,41
1,28
88,46
Variable region (nt 44)
A
C
G
T
2,56
0
0
97,44
0
0
100
0
100
0
0
0
0
0
0
100
5' T-stern (nt 49)
A
C
G
T
2,56
0
97,44
0
0
1,28
0
98,72
76,92
0
23,08
0
76,92
0
23,08
0
1,28
0
98,72
0
T-loop (nt 54)
A
C
G
T
84,62
0
14,1
1,28
2,56
0
0
97,44
78,21
0
19,23
2,56
10,26
1,28
29,49
58,97
67,95
0
32,05
0
11,54
2,56
69,23
16,67
1,28
0
0
94,87
1,28
0
0
0
0
0
0
100
5' T-stern (nt 61)
A
C
G
T
0
98,72
0
1,28
0
3,85
0
96,15
0
7,69
0
92,31
1,28
0
98,72
0
0
96,15
0
3,85
3' Accepter sterm (nt 66)
A
C
G
T
98,72
0
1,28
0
32,05
0
67,95
0
0
5,13
0
94,87
0
97,44
0
2,56
0
96,15
0
3,85
0
2,56
0
97,44
0
0
0
100
Discriminator base (nt 73)
A
C
G
T
98,72
0
1,28
0

Base pairing : Watson Crick (WC), G-T and MisMatch (Mis)
WC (%)GT (%)Mis (%)
37,1862,820
10000
98,721,280
98,721,280
71,7928,210
73,0826,920
10000
WC (%)GT (%)Mis (%)
15,3883,331,28
98,721,280
10000
10000
WC (%)GT (%)Mis (%)
20,5138,4641,03
76,9220,512,56
98,721,280
10000
94,871,283,85
WC (%)GT (%)Mis (%)
98,721,280
2,5697,440
84,6215,380
80,7719,230
10000

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